Tuesday, February 8 |
8:00 a.m. - 8:30 a.m |
Welcome and Introductions
Leland Hartwell, Ph.D.
Fred Hutchinson Cancer Research Center
 Anna D. Barker, Ph.D. (Powerpoint - Size: 4.3 MB)
National Cancer Institute
National Institutes of Health
Gregory J. Downing, D.O., Ph.D.
National Cancer Institute
National Institutes of Health |
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8:30 a.m. - 9:45 a.m. |
Overview of Mouse Proteomic Technology Consortia and Informatics Plans
Samir M. Hanash, M.D., Ph.D. (Powerpoint - Size: 1.8 MB)
Fred Hutchinson Cancer Research Center
Martin W. McIntosh, Ph.D. (Powerpoint - Size: 2.4 MB)
Proteomics Computational Laboratory
Fred Hutchinson Cancer Research Center |
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9:45 a.m. - 10:00 a.m |
Discussion Sessions |
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10:00 a.m. - 12:00 noon |
Session 1: Use-Cases for a Proteomics Data Repository
Discussion Group Leaders:
John J.M. Bergeron, D.Phil. (Powerpoint - Size: 9.6 MB)
McGill University
Raju Kucherlapati, Ph.D. (Powerpoint - Size: 95kb)
Harvard Medical School-Partners HealthCare System, Inc.
Philip Jones, M.Sc. (Powerpoint - Size: 704kb)
European Bioinformatics Institute
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12:45 p.m. - 2:45 p.m |
Session 2: Specimens, Experimental Annotations, and Data Quality
Steve Carr, Ph.D. (Powerpoint - Size: 275kb)
The Broad Institute
Eric Deutsch, Ph.D. (Powerpoint - Size: 931kb)
Institute for Systems Biology
David J. States, M.D., Ph.D. (Powerpoint - Size: 98kb)
School of Medicine
University of Michigan |
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3:00 p.m. - 5:00 p.m |
Session 3: Lessons and Challenges of Building Data Repositories
Kenneth H. Buetow, Ph.D. (Powerpoint - Size: 543kb)
National Cancer Institute
National Institutes of Health
Ronald Beavis, Ph.D. (Powerpoint - Size: 632kb)
Beavis Informatics, Ltd.
Mark Igra (Powerpoint - Size: 930kb)
Fred Hutchinson Cancer Research Center |
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7:30 p.m. - 8:30 p.m. |
Keynote Address
Quality Control for Large, Distributed Data Collection Efforts: Lessons From the Human Genome Project
Maynard V. Olson, Ph.D. (Powerpoint - Size: 3.1 MB)
Genome Center
University of Washington |
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| Wednesday, February 9 |
8:00 a.m. - 8:15 a.m |
Summary
Leland Hartwell, Ph.D.
Fred Hutchinson Cancer Research Center
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8:15 a.m. - 9:45 a.m. |
Breakout Groups |
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Group A: |
Analytical Tools |
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Discussion Group Leaders:
Pierre-Alain Binz, Ph.D. (Powerpoint - Size: 903kb)
Proteome Informatics Group
Swiss Institute of Bioinformatics
Michael Ochs, Ph.D. (Powerpoint - Size: 903kb)
Fox Chase Cancer Center
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Group B: |
Data Standards and Architecture |
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Discussion Group Leaders:
Philip Jones, M.Sc.
European Bioinformatics Institute
Simon Lin, M.D.
Duke University Medical Center |
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10:00 a.m. - 10:45 a.m. |
Session 4: Report Out and Discussion
Discussion Group Leaders:
Pierre-Alain Binz, Ph.D. (Powerpoint - Size: 70kb)
Proteome Informatics Group
Swiss Institute of Bioinformatics
Michael Ochs, Ph.D. (Powerpoint - Size: 903kb)
Fox Chase Cancer Center
Weimin Zhu, M.Eng. (Powerpoint - Size: 71kb)
European Bioinformatics Institute
Simon Lin, M.D. (Powerpoint - Size: 71kb)
Duke University Medical Center |
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10:45 a.m. - 11:45 a.m. |
Session 5: Requirements of a General Clinical Proteomics Informatics Resource
Discussion Group Leaders:
Stephen George Oliver, Ph.D. (Powerpoint - Size: 5.2 MB)
Faculty of Life Sciences
University of Manchester
Samir M. Hanash, M.D., Ph.D.
Fred Hutchinson Cancer Research Center
Martin W. McIntosh, Ph.D.
Proteomics Computational Laboratory
Fred Hutchinson
Cancer Research Center |
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11:45 a.m. - 12:00 noon |
Next Steps and Closing Remarks |
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12:00 noon |
Adjournment |
